Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI4485ALLY
IGVFFI4485ALLY
released
validated
Json view
File Set
IGVFDS2000OICT
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI9107IXXE, IGVFFI5524QZQB, IGVFFI7927GCWX, IGVFFI5676UCVR
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp3_rna_10x1_NGS1
md5sum
c3c8e7666746161baaa65834c1ba0da9
Content MD5sum
4d38d4e57135d9dfd869acb2badf5d2e
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp3_rna_10x1_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI5524QZQB
fastq
reads
1
Read 2
Illumina NovaSeq X
223JJCLT3
1
10 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5676UCVR
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
1
1.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7927GCWX
fastq
reads
1
Read 1
Illumina NovaSeq X
223JJCLT3
1
4.6 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9107IXXE
fastq
reads
1
Illumina NovaSeq X
223JJCLT3
1
1.4 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4259POAT
MultiplexedSample
GM25256 (WTC-11)
,
H9
,
HepG2
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford