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INDEXED
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ConfigurationFile
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IGVFFI4378DGLH
IGVFFI4378DGLH
released
validated
Json view
File Set
IGVFDS2040MXVF
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI9480NAWH, IGVFFI4354UZDA, IGVFFI2539WWSL
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4313_seqspec
md5sum
0d0a6cce053abcac5cadce2e6927586a
Content MD5sum
bf10a2eb62c768e270d9c3b6da3d1e84
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI9480NAWH_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2539WWSL
fastq
reads
4313
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
2.4 GB
Jason Buenrostro, Broad
validated
IGVFFI4354UZDA
fastq
reads
4313
Read 2
Illumina NovaSeq 6000
H75F7DSX5
3.1 GB
Jason Buenrostro, Broad
validated
IGVFFI9480NAWH
fastq
reads
4313
Read 1
Illumina NovaSeq 6000
H75F7DSX5
6.8 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3191EHDK
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 168)