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INDEXED
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ConfigurationFile
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IGVFFI4299ENXR
IGVFFI4299ENXR
released
validated
Json view
File Set
IGVFDS1381KOVA
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI9066SKTV, IGVFFI7934ZMBN, IGVFFI7374OCNF, IGVFFI7951TRNJ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp17_rna_10x4_NGS4
md5sum
71433069f73b47a246909613ee13c79d
Content MD5sum
d8ef79bae4870be7ef3d8f8d8d6acd74
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp17_rna_10x4_NGS4_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI7374OCNF
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
8
1.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7934ZMBN
fastq
reads
1
Read 2
Illumina NovaSeq X
22NCYLLT3
8
8.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7951TRNJ
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
8
1.2 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9066SKTV
fastq
reads
1
Read 1
Illumina NovaSeq X
22NCYLLT3
8
4.4 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9149ZACE
MultiplexedSample
RUES2
multiplexed sample: RUES2 differentiated cell specimen induced to gastrula for 2 days, female, Homo sapiens; RUES2 differentiated cell specimen induced to gastrula for 1 day, female, Homo sapiens; ... and 10 more samples
Attribution
Award
HG011972
Principal Investigator(s)
Anshul Kundaje
,
Jesse Engreitz
,
Marlene Rabinovitch
,
Lars Steinmetz
,
Michael Bassik
,
Thomas Quertermous
,
Will Greenleaf
Contact P.I.
Jesse Engreitz
Lab
Ansuman Satpathy, Stanford