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INDEXED
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ConfigurationFile
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IGVFFI4296ZJRS
IGVFFI4296ZJRS
released
validated
Json view
File Set
IGVFDS5841CMLA
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI9904OBDT, IGVFFI1895BUYA, IGVFFI3920VHRX
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI9904OBDT_seqspec
md5sum
5aa0b23fc53b5ad5c2b7b8e0a2ee11fa
Content MD5sum
5f8cfbe8a5649b1da8ec417f0b1f5211
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI9904OBDT_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1895BUYA
fastq
reads
1
Read 1
Illumina NovaSeq 6000
4.2 GB
Jason Buenrostro, Broad
validated
IGVFFI3920VHRX
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
2.9 GB
Jason Buenrostro, Broad
validated
IGVFFI9904OBDT
fastq
reads
1
Read 2
Illumina NovaSeq 6000
4.1 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0332KRWE
PrimaryCell
colon
Mus musculus C57BL/6J colon cell