Home

IGVFFI4244QAXF

released
validated
File Set
IGVFDS8078FJZR(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI8093PSPU, IGVFFI9300DFWT
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_2008_seqspec
md5sum
a69d3a14ff9b4b020044d756e8fbff58
Content MD5sum
853dbbab89694ca735fa9e94862685ee
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2008_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
248
Read 1
357 MB
Jason Buenrostro, Broad
validated
fastq
reads
248
Read 2, Barcode index
632 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
367 MB
validated
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.2 GB
validated