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INDEXED
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IGVFFI4193HYHU
IGVFFI4193HYHU
released
validated
Json view
File Set
IGVFDS4668AHMA
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI9418OXRP, IGVFFI3918JHPL, IGVFFI3227EXXN, IGVFFI9871LHTG
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp6_rna_10x3_NGS2
md5sum
7682dbaab5ef84dd2d7a7a662395ea41
Content MD5sum
aec29e9c74500be532b8a88246b2bf20
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp6_rna_10x3_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3227EXXN
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
2
559 MB
Ansuman Satpathy, Stanford
validated
IGVFFI3918JHPL
fastq
reads
1
Illumina NovaSeq X
223JHMLT3
2
546 MB
Ansuman Satpathy, Stanford
validated
IGVFFI9418OXRP
fastq
reads
1
Read 2
Illumina NovaSeq X
223JHMLT3
2
4.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9871LHTG
fastq
reads
1
Read 1
Illumina NovaSeq X
223JHMLT3
2
1.9 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8276PHGD
MultiplexedSample
H1-hESC
multiplexed sample: H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days, male, Homo sapiens; H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days, male, Homo sapiens; ... and 6 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford