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INDEXED
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ConfigurationFile
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IGVFFI4101FQNX
IGVFFI4101FQNX
released
validated
Json view
File Set
IGVFDS9931JAJO
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0324KRDV, IGVFFI2080AZSU
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8352_seqspec
md5sum
a6ec72c533859802644c361090192793
Content MD5sum
daf3c1d7dbe8aeac6631389a2108e7ef
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8352_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0324KRDV
fastq
reads
8352
Read 1
Illumina NovaSeq X
22V3MJLT3
484 MB
Jason Buenrostro, Broad
validated
IGVFFI2080AZSU
fastq
reads
8352
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
682 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1865KZPO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)