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IGVFFI4024AMLP

released
validated
File Set
IGVFDS4752BWME(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI2687PPWC, IGVFFI1887QOUN
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5378_seqspec
md5sum
da3b6ae6b1d58311208d19c77e577283
Content MD5sum
3777f04097488632488f7372f0a316b2
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5378_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5378
Read 2, Barcode index
22KHF5LT3
12 GB
Jason Buenrostro, Broad
validated
fastq
reads
5378
Read 1
22KHF5LT3
7.2 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)

Files Derived From This File

2 items
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
6.8 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
1.2 GB
validated