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IGVFFI3943XKRN

released
validated
File Set
IGVFDS3032KHHX(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2472BMSD, IGVFFI4385PBLT
File Format
yaml
Content Type
seqspec
Aliases
bradley-bernstein:SS-LS_2033_seqspec
md5sum
855c1d1e3fb4c27c8bdcb4235d93753c
Content MD5sum
2f99966133b72e9e50c671be1d0650e9
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2033_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
239
Read 1
121 MB
Jason Buenrostro, Broad
validated
fastq
reads
239
Read 2, Barcode index
212 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
3.0 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
423 MB
validated