Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI3782CFTC
IGVFFI3782CFTC
released
validated
Json view
File Set
IGVFDS0262EFJS
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI8469AYWW, IGVFFI4885KWUD, IGVFFI9358RLQV
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI8469AYWW_seqspec
md5sum
68bb9c2a4a0d5255916457960da03f02
Content MD5sum
c1459a2ebed68ce639b6658bd8e6b41a
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI8469AYWW_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4885KWUD
fastq
reads
1
Read 2
Illumina NovaSeq 6000
3.6 GB
Jason Buenrostro, Broad
validated
IGVFFI8469AYWW
fastq
reads
1
Read 1
Illumina NovaSeq 6000
3.8 GB
Jason Buenrostro, Broad
validated
IGVFFI9358RLQV
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
2.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4239FRER
InVitroSystem
colonic epithelium
Mus musculus C57BL/6J colonic epithelium organoid induced to colon for 27 days