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INDEXED
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IGVFFI3725KCVI
IGVFFI3725KCVI
released
validated
Json view
File Set
IGVFDS3842BVTL
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI2943ADPZ, IGVFFI0263RIPI, IGVFFI5675GUYI, IGVFFI2245QWJG
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_rna_10x1_NGS2
md5sum
b2a44cc7c3a3c9cfec6f2c5cc14fdc8a
Content MD5sum
fe469fbbd6e0d3f06c8a1a4233b50ba2
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_rna_10x1_NGS2_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0263RIPI
fastq
reads
1
Read 1
Illumina NovaSeq X
22HHHWLT3
2
6.9 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2245QWJG
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
2
1.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI2943ADPZ
fastq
reads
1
Read 2
Illumina NovaSeq X
22HHHWLT3
2
15 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5675GUYI
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
2
1.8 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6422YWWA
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples