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INDEXED
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ConfigurationFile
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IGVFFI3504KXXL
IGVFFI3504KXXL
released
validated
Json view
File Set
IGVFDS4464LQXA
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI8569MXAP, IGVFFI0012VGXP
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_2073_seqspec
md5sum
28cad2cccc63a38ef7121045919f1063
Content MD5sum
dcc4cd3006d997af6f49e596e3c11365
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2073_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0012VGXP
fastq
reads
172
Read 2, Barcode index
Illumina NovaSeq 6000
1.0 GB
Jason Buenrostro, Broad
validated
IGVFFI8569MXAP
fastq
reads
172
Read 1
Illumina NovaSeq 6000
702 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9781HISX
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)