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IGVFFI3504KXXL

released
validated
File Set
IGVFDS4464LQXA(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI8569MXAP, IGVFFI0012VGXP
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_2073_seqspec
md5sum
28cad2cccc63a38ef7121045919f1063
Content MD5sum
dcc4cd3006d997af6f49e596e3c11365
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2073_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
172
Read 2, Barcode index
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
172
Read 1
702 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

Files Derived From This File

2 items
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.2 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
924 MB
validated