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INDEXED
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IGVFFI3482OQHE
IGVFFI3482OQHE
released
validated
Json view
File Set
IGVFDS3634TPOY
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI1987SXGY, IGVFFI7019QIXG, IGVFFI1953XXJJ, IGVFFI0497MYVR
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp9_rna_10x1_NGS3
md5sum
7beb5c11ea5a1c27ddb7461c82e5cb6b
Content MD5sum
1e79a3fed789ebcc5c0ab3200e6bf365
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp9_rna_10x1_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0497MYVR
fastq
reads
1
Read 2
Illumina NovaSeq X
223JHYLT3
3
17 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1953XXJJ
fastq
reads
1
Illumina NovaSeq X
223JHYLT3
3
1.8 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1987SXGY
fastq
reads
1
Illumina NovaSeq X
223JHYLT3
3
2.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7019QIXG
fastq
reads
1
Read 1
Illumina NovaSeq X
223JHYLT3
3
7.6 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9678IFHW
MultiplexedSample
B cell
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 1 day; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 5 days; ... and 5 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford