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INDEXED
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ConfigurationFile
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IGVFFI3468IMGQ
IGVFFI3468IMGQ
released
validated
Json view
File Set
IGVFDS4174PVSF
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2874QLUX, IGVFFI6916HPCW
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8379_seqspec
md5sum
bd2e16bfd053a553cb2fa284a5444064
Content MD5sum
7e43b09df09e3e35220f05253772847f
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8379_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2874QLUX
fastq
reads
8379
Read 1
Illumina NovaSeq X
22V3MJLT3
3.9 GB
Jason Buenrostro, Broad
validated
IGVFFI6916HPCW
fastq
reads
8379
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
5.4 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1137TONP
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 602)