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INDEXED
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ConfigurationFile
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IGVFFI3396JOOQ
IGVFFI3396JOOQ
released
validated
Json view
File Set
IGVFDS9037YGVR
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2017WNYH, IGVFFI7020LGOW
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8350_seqspec
md5sum
ccdeb887b1e54f65bc6566d9838a26fc
Content MD5sum
aaba32fb5f34ace7eb7f365b52c6735b
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8350_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2017WNYH
fastq
reads
8350
Read 1
Illumina NovaSeq X
22V3MJLT3
1.1 GB
Jason Buenrostro, Broad
validated
IGVFFI7020LGOW
fastq
reads
8350
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
1.5 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3008DKJO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 583)