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INDEXED
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IGVFFI3326LMXA
IGVFFI3326LMXA
released
validated
Json view
File Set
IGVFDS1219HABJ
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI6009UHFF, IGVFFI3959UNRX, IGVFFI9858XPPU, IGVFFI2020EQIE
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x2_NGS1
md5sum
614b716c6a4cba84bb4f1cd3822c80a5
Content MD5sum
c51e4a9e9f64f258dbe0e92f4f66e717
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x2_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2020EQIE
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
1
9.0 GB
Ansuman Satpathy, Stanford
validated
IGVFFI3959UNRX
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
1
4.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6009UHFF
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
1
1.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9858XPPU
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
1
1.2 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5189FTFS
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford