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INDEXED
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ConfigurationFile
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IGVFFI3248DTTM
IGVFFI3248DTTM
released
validated
Json view
File Set
IGVFDS5083GBBF
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI4034UCLF, IGVFFI1173DRYT
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7336_seqspec
md5sum
ebe7d123611ab46e63710c56b2b7eb7a
Content MD5sum
10645436e84c5b1a5e7c6b081f73d73b
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7336_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1173DRYT
fastq
reads
7336
Read 2, Barcode index
Illumina NovaSeq 6000
22KFF5LT3
10 GB
Jason Buenrostro, Broad
validated
IGVFFI4034UCLF
fastq
reads
7336
Read 1
Illumina NovaSeq 6000
22KFF5LT3
6.9 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)