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INDEXED
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ConfigurationFile
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IGVFFI3229XWTT
IGVFFI3229XWTT
released
validated
Json view
File Set
IGVFDS5588TNTQ
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0001PUWH, IGVFFI9130RWLB, IGVFFI1403ORLE
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4344_seqspec
md5sum
68f1c7fe9edae5faa5067524add07474
Content MD5sum
149107488608adacbffa781eb136ba28
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI0001PUWH_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0001PUWH
fastq
reads
4344
Read 1
Illumina NovaSeq 6000
H75F7DSX5
3.1 GB
Jason Buenrostro, Broad
validated
IGVFFI1403ORLE
fastq
reads
4344
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
1.1 GB
Jason Buenrostro, Broad
validated
IGVFFI9130RWLB
fastq
reads
4344
Read 2
Illumina NovaSeq 6000
H75F7DSX5
1.4 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9122KZMY
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 207)