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INDEXED
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ConfigurationFile
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IGVFFI3216RCJI
IGVFFI3216RCJI
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI9683RWGO, IGVFFI6211UCEG
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5361_seqspec
md5sum
3e7265bf1cae2c0980f59a2a321394b8
Content MD5sum
548c1d3ea45af391c93cc0978d029f0f
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5361_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI6211UCEG
fastq
reads
5361
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
10 GB
Jason Buenrostro, Broad
validated
IGVFFI9683RWGO
fastq
reads
5361
Read 1
Illumina NovaSeq 6000
22KHF5LT3
7.2 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)