IGVFFI3134QZNI

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    "accession": "IGVFFI3134QZNI",
    "aliases": [
        "ansuman-satpathy:seqspec_igvf_exp5_atac_10x4_NGS3"
    ],
    "assay_titles": [
        "10x multiome with MULTI-seq"
    ],
    "audit": {},
    "award": {
        "@id": "/awards/HG012076/",
        "component": "mapping"
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    "checkfiles_version": "v16",
    "content_md5sum": "c01237b3b2054d3acb5a79232cfef2c2",
    "content_type": "seqspec",
    "creation_timestamp": "2024-09-18T02:39:24.318684+00:00",
    "file_format": "yaml",
    "file_set": {
        "@id": "/measurement-sets/IGVFDS1201SHMG/",
        "accession": "IGVFDS1201SHMG",
        "file_set_type": "experimental data",
        "samples": [
            {
                "@id": "/multiplexed-samples/IGVFSM3106AWHF/",
                "accession": "IGVFSM3106AWHF",
                "classifications": [
                    "cell line",
                    "differentiated cell specimen",
                    "gastruloid",
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                "disease_terms": [],
                "modifications": [],
                "sample_terms": [
                    {
                        "@id": "/sample-terms/EFO_0001184/",
                        "status": "released",
                        "term_name": "HEK293T"
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                    {
                        "@id": "/sample-terms/EFO_0003042/",
                        "status": "released",
                        "term_name": "H1-hESC"
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                    {
                        "@id": "/sample-terms/EFO_0003045/",
                        "status": "released",
                        "term_name": "H9"
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                    {
                        "@id": "/sample-terms/EFO_0009747/",
                        "status": "released",
                        "term_name": "GM25256 (WTC-11)"
                    }
                ],
                "status": "released",
                "summary": "multiplexed sample: H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; H9 differentiated cell specimen induced to neuron for 6 days, female, Homo sapiens; ... and 6 more samples",
                "taxa": "Homo sapiens",
                "treatments": []
            }
        ],
        "status": "released",
        "summary": "single-nucleus ATAC-seq (10x multiome with MULTI-seq)"
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    "gene_list_for": [],
    "href": "/configuration-files/IGVFFI3134QZNI/@@download/IGVFFI3134QZNI.yaml.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/ansuman-satpathy/",
        "title": "Ansuman Satpathy, Stanford"
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    "loci_list_for": [],
    "md5sum": "9cb178a3bf46902d5976c35c8805822e",
    "quality_metrics": [],
    "release_timestamp": "2025-03-07T01:12:09.731004+00:00",
    "s3_uri": "s3://igvf-files/2024/09/18/d9f0db0d-3354-487f-9021-3db069c7abad/IGVFFI3134QZNI.yaml.gz",
    "schema_version": "7",
    "seqspec_of": [
        "/sequence-files/IGVFFI8178MMRN/",
        "/sequence-files/IGVFFI6031EVUX/",
        "/sequence-files/IGVFFI5932BKWH/",
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    "status": "released",
    "submitted_by": {
        "@id": "/users/353655bc-31a1-4cd9-bac3-c7d34faf722f/",
        "title": "Christopher Mcginnis"
    },
    "submitted_file_name": "/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp5_atac_10x4_NGS3_atac_seqspec.yaml.gz",
    "summary": "seqspec of IGVFFI8178MMRN, IGVFFI6031EVUX, IGVFFI5932BKWH, IGVFFI6814AKKH",
    "upload_status": "validated",
    "uuid": "d9f0db0d-3354-487f-9021-3db069c7abad",
    "validate_onlist_files": true
}