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INDEXED
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ConfigurationFile
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IGVFFI3091GPCZ
IGVFFI3091GPCZ
released
validated
Json view
File Set
IGVFDS7297BZEA
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI5173OOCG, IGVFFI7447ADYF, IGVFFI0654TGFR, IGVFFI4290NHEB
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x5_NGS5
md5sum
731c89213986a48a6ceac355fcc23e0a
Content MD5sum
1661e5d837b5ff52d7ad833593bd7122
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x5_NGS5_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0654TGFR
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
5
3.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI4290NHEB
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
5
1.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5173OOCG
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
5
7.1 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7447ADYF
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
5
1.0 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1640UGWP
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples