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IGVFFI3016TXPY
IGVFFI3016TXPY
released
validated
Json view
File Set
IGVFDS5763YUNI
(lipid-conjugated oligo sequencing for single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI2225FVCX, IGVFFI6048LIGI, IGVFFI8604DCCP, IGVFFI2627OZFZ
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp17_multi_10x4_NGS1
md5sum
d681036ac1a688d2472cd9d6b1aae7f9
Content MD5sum
9bda0802512a28087b0236c9030b6eb7
File Size
1.3 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec_new/igvf_exp17_multi_10x4_NGS1_multi_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2225FVCX
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
5
178 MB
Ansuman Satpathy, Stanford
validated
IGVFFI2627OZFZ
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
5
53 MB
Ansuman Satpathy, Stanford
validated
IGVFFI6048LIGI
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
5
404 MB
Ansuman Satpathy, Stanford
validated
IGVFFI8604DCCP
fastq
reads
1
Illumina NovaSeq X
22NCYLLT3
5
72 MB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9149ZACE
MultiplexedSample
RUES2
multiplexed sample: RUES2 differentiated cell specimen induced to gastrula for 2 days, female, Homo sapiens; RUES2 differentiated cell specimen induced to gastrula for 1 day, female, Homo sapiens; ... and 10 more samples
Attribution
Award
HG011972
Principal Investigator(s)
Anshul Kundaje
,
Jesse Engreitz
,
Marlene Rabinovitch
,
Lars Steinmetz
,
Michael Bassik
,
Thomas Quertermous
,
Will Greenleaf
Contact P.I.
Jesse Engreitz
Lab
Ansuman Satpathy, Stanford