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INDEXED
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IGVFFI3005BCCA
IGVFFI3005BCCA
released
validated
Json view
File Set
IGVFDS8924NQYH
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI1724FCXI, IGVFFI7154IKYZ, IGVFFI7118AMZQ, IGVFFI4115JTAS
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x7_NGS4
md5sum
a14efa478c7ed905611b0919e810bfb4
Content MD5sum
cd7ec480b0ed2b13b3067b8300b438f3
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x7_NGS4_rna_seqspec.yaml.gz
Checkfiles Version
v16
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1724FCXI
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
4
981 MB
Ansuman Satpathy, Stanford
validated
IGVFFI4115JTAS
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
4
3.5 GB
Ansuman Satpathy, Stanford
validated
IGVFFI7118AMZQ
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
4
930 MB
Ansuman Satpathy, Stanford
validated
IGVFFI7154IKYZ
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
4
7.6 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6125HAMH
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples
Attribution
Award
HG012076
Principal Investigator(s)
Ansuman Satpathy
Contact P.I.
Ansuman Satpathy
Lab
Ansuman Satpathy, Stanford