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INDEXED
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ConfigurationFile
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IGVFFI2931DFDH
IGVFFI2931DFDH
released
validated
Json view
File Set
IGVFDS9590NQAN
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI1962LRKH, IGVFFI8215QINU, IGVFFI3190NPOP
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_9048_seqspec
md5sum
b19a3eb87a334569713422656a5d755c
Content MD5sum
c3dab020fdd0732793c76eb293a87f18
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI1962LRKH_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1962LRKH
fastq
reads
9048
Read 1
Illumina NovaSeq X
22LMVNLT4
1.0 GB
Jason Buenrostro, Broad
validated
IGVFFI3190NPOP
fastq
reads
9048
Barcode index
Illumina NovaSeq X
22LMVNLT4
605 MB
Jason Buenrostro, Broad
validated
IGVFFI8215QINU
fastq
reads
9048
Read 2
Illumina NovaSeq X
22LMVNLT4
995 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4941CPCX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 180)