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IGVFFI2897TNFT

released
validated
File Set
IGVFDS7938OXSK(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI7735CDGU, IGVFFI3521DARM
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5381_seqspec
md5sum
db3ca923cbddec93e44075d8be6c5487
Content MD5sum
385410f5efc93352a30bffd490686a66
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5381_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5381
Read 2, Barcode index
22KHF5LT3
6.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
5381
Read 1
22KHF5LT3
4.1 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated