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INDEXED
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ConfigurationFile
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IGVFFI2891FJDF
IGVFFI2891FJDF
released
validated
Json view
File Set
IGVFDS4606LBDI
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0090ASPL, IGVFFI2814XDYY, IGVFFI9505FIRD
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4340_seqspec
md5sum
fb42593fd50d07a0ffe1885befa58dee
Content MD5sum
0720941a3f85fa7c558b5888b7ee93c4
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI0090ASPL_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0090ASPL
fastq
reads
4340
Read 1
Illumina NovaSeq 6000
H75F7DSX5
3.6 GB
Jason Buenrostro, Broad
validated
IGVFFI2814XDYY
fastq
reads
4340
Read 2
Illumina NovaSeq 6000
H75F7DSX5
1.6 GB
Jason Buenrostro, Broad
validated
IGVFFI9505FIRD
fastq
reads
4340
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
1.3 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3303ZLKL
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 177)