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IGVFFI2800VZKP

released
validated
File Set
IGVFDS5083GBBF(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI0312VUCN, IGVFFI3204NMTN
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5373_seqspec
md5sum
e84f70f505a89c85d5b4676d13834ed4
Content MD5sum
0460059b8893c4875fb637086f1b422a
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5373_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5373
Read 1
22KHF5LT3
6.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
5373
Read 2, Barcode index
22KHF5LT3
8.7 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)

Files Derived From This File

2 items
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
1.3 GB
validated
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
18 GB
validated