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IGVFFI2796FVAW

released
validated
File Set
IGVFDS4464LQXA(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI0446XXIA, IGVFFI8770YVGL
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_2120_seqspec
md5sum
76af70f329e59ab6fb66f29a64357beb
Content MD5sum
5f925f6efbd153ef4e2d0cdacda45585
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2120_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
173
Read 1
668 MB
Jason Buenrostro, Broad
validated
fastq
reads
173
Read 2, Barcode index
993 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

Files Derived From This File

2 items
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.2 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
924 MB
validated