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INDEXED
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ConfigurationFile
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IGVFFI2791ZIPI
IGVFFI2791ZIPI
released
validated
Json view
File Set
IGVFDS4624JCMI
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI6378KBKR, IGVFFI9160OFRT
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8348_seqspec
md5sum
e457aa08ada691cf8a3049d235edce55
Content MD5sum
fd06674342bd75a38748547fd5873440
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8348_seqspec.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI6378KBKR
fastq
reads
8348
Read 1
Illumina NovaSeq X
22V3MJLT3
1.3 GB
Jason Buenrostro, Broad
validated
IGVFFI9160OFRT
fastq
reads
8348
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
1.9 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7633DIYU
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 576)