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INDEXED
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ConfigurationFile
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IGVFFI2767QKQJ
IGVFFI2767QKQJ
released
validated
Json view
File Set
IGVFDS0079JXLN
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI3003IRGJ, IGVFFI5993DNOE, IGVFFI4159RPQQ
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4043_seqspec
md5sum
6f1d2e1c61814c7851937864f53811cd
Content MD5sum
a793fb7c75239e30e2c904d61f927ae3
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI3003IRGJ_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3003IRGJ
fastq
reads
4043
Read 1
Illumina NovaSeq X
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
IGVFFI4159RPQQ
fastq
reads
4043
Barcode index
Illumina NovaSeq X
22523KLT3
459 MB
Jason Buenrostro, Broad
validated
IGVFFI5993DNOE
fastq
reads
4043
Read 2
Illumina NovaSeq X
22523KLT3
530 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3457JHWU
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 173)