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INDEXED
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ConfigurationFile
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IGVFFI2764HFQD
IGVFFI2764HFQD
released
validated
Json view
File Set
IGVFDS9866LFTQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI0834RTNI, IGVFFI9814XYUH
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3831_seqspec
md5sum
76a3a1245928dcdc62443f40eb1050a3
Content MD5sum
8eff70f8e902df456a3e26511914362f
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3831_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0834RTNI
fastq
reads
3831
Read 1
Illumina NovaSeq 6000
H22KKDRX5
570 MB
Jason Buenrostro, Broad
validated
IGVFFI9814XYUH
fastq
reads
3831
Read 2, Barcode index
Illumina NovaSeq 6000
H22KKDRX5
938 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)