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IGVFFI2764HFQD

released
validated
File Set
IGVFDS9866LFTQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI0834RTNI, IGVFFI9814XYUH
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3831_seqspec
md5sum
76a3a1245928dcdc62443f40eb1050a3
Content MD5sum
8eff70f8e902df456a3e26511914362f
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3831_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
3831
Read 1
H22KKDRX5
570 MB
Jason Buenrostro, Broad
validated
fastq
reads
3831
Read 2, Barcode index
H22KKDRX5
938 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated