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INDEXED
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ConfigurationFile
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IGVFFI2731URZQ
IGVFFI2731URZQ
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI6309QCHM, IGVFFI9654PVVK
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5365_seqspec
md5sum
19224370f0d661fc227632c8368db678
Content MD5sum
eabe705bd1797af19b21291307733093
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5365_seqspec.yaml.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI6309QCHM
fastq
reads
5365
Read 1
Illumina NovaSeq 6000
22KHF5LT3
6.5 GB
Jason Buenrostro, Broad
validated
IGVFFI9654PVVK
fastq
reads
5365
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
9.4 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)