Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI2690LYCN
IGVFFI2690LYCN
released
validated
Json view
File Set
IGVFDS9896MQFE
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI9017EKJQ, IGVFFI1732SLOD, IGVFFI9072DUME
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI1732SLOD_seqspec
md5sum
8880a19375b198a634b075e92ea411fb
Content MD5sum
beb222700431d897ad94b61709652d17
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI1732SLOD_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1732SLOD
fastq
reads
5
Read 1
Illumina NovaSeq 6000
9.4 GB
Jason Buenrostro, Broad
validated
IGVFFI9017EKJQ
fastq
reads
5
Read 2
Illumina NovaSeq 6000
10 GB
Jason Buenrostro, Broad
validated
IGVFFI9072DUME
fastq
reads
5
Barcode index
Illumina NovaSeq 6000
3.1 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1242TZJM
PrimaryCell
colon
Mus musculus C57BL/6J colon cell