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IGVFFI2665KLTA

released
validated
File Set
IGVFDS8623UWKX(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI6227GVAN, IGVFFI4731HIPN
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3821_seqspec
md5sum
3496c9331ef1d0fd354dff0de27f8906
Content MD5sum
8079fec2980ab0f2748798a608d136af
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3821_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
3821
Read 2, Barcode index
H22KKDRX5
894 MB
Jason Buenrostro, Broad
validated
fastq
reads
3821
Read 1
H22KKDRX5
541 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated