Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
ConfigurationFile
/
IGVFFI2654VXSR
IGVFFI2654VXSR
released
validated
Json view
File Set
IGVFDS4128FOHH
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2941MMCJ, IGVFFI9334WAOR, IGVFFI7197NSEL
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:IGVFFI2941MMCJ_seqspec
md5sum
de7b47d1542e88ac1d44d81dd4334480
Content MD5sum
a91ae21abf7845e0c1fd2f7d726e4462
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/seqspecs/IGVFFI2941MMCJ_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2941MMCJ
fastq
reads
1
Read 1
Illumina NovaSeq 6000
6.7 GB
Jason Buenrostro, Broad
validated
IGVFFI7197NSEL
fastq
reads
1
Barcode index
Illumina NovaSeq 6000
2.5 GB
Jason Buenrostro, Broad
validated
IGVFFI9334WAOR
fastq
reads
1
Read 2
Illumina NovaSeq 6000
6.7 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6844DNNZ
Tissue
colon
Mus musculus C57BL/6J colon tissue