Home

IGVFFI2622TPEI

released
validated
File Set
IGVFDS9866LFTQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI1199GCIN, IGVFFI4949HHAZ
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_3807_seqspec
md5sum
6a1a8ebbdc2c0e059400752975779f50
Content MD5sum
3049ff7388387e74e63039c5aff28127
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_3807_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
3807
Read 1
H22KKDRX5
562 MB
Jason Buenrostro, Broad
validated
fastq
reads
3807
Read 2, Barcode index
H22KKDRX5
920 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
976 MB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
5.5 GB
validated