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INDEXED
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ConfigurationFile
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IGVFFI2598WSHP
IGVFFI2598WSHP
released
validated
Json view
File Set
IGVFDS3977WBMS
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI4877DKZW, IGVFFI0707UFPZ
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5380_seqspec
md5sum
55aad6bf109984295a5b236f7a9fe169
Content MD5sum
3615f7941e37295df3536c9fcf970d16
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5380_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0707UFPZ
fastq
reads
5380
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
15 GB
Jason Buenrostro, Broad
validated
IGVFFI4877DKZW
fastq
reads
5380
Read 1
Illumina NovaSeq 6000
22KHF5LT3
9.0 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)