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INDEXED
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ConfigurationFile
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IGVFFI2440HNXJ
IGVFFI2440HNXJ
released
validated
Json view
File Set
IGVFDS1219HABJ
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI5285VZSI, IGVFFI4487QEKM, IGVFFI8140PWUS, IGVFFI6150YTSN
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp12_rna_10x2_NGS4
md5sum
27308d869f9dda743525698ec2322365
Content MD5sum
a806c1354313a194ad09e7ece2d45225
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp12_rna_10x2_NGS4_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4487QEKM
fastq
reads
1
Read 1
Illumina NovaSeq X
225LWLLT3
4
4.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5285VZSI
fastq
reads
1
Read 2
Illumina NovaSeq X
225LWLLT3
4
9.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6150YTSN
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
4
1.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI8140PWUS
fastq
reads
1
Illumina NovaSeq X
225LWLLT3
4
1.4 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5189FTFS
MultiplexedSample
B cell
,
bone marrow
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples