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IGVFFI2429SQBP

released
validated
File Set
IGVFDS8929VNCP(gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
seqspec of IGVFFI5295OHTL, IGVFFI3658HZBE, IGVFFI6893EPCL
File Format
yaml
Content Type
seqspec
Aliases
jay-shendure:CRISPRa_singlecell_K562_VP64_10Xlane2_seqlane1_CS1_seqspec
md5sum
7c47aef0059e10fe4e09b9b85ee66f92
Content MD5sum
31a2115e2b8abc61ac538abdff753503
File Size
1.4 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/seqspecs/CRISPRa/CRISPRa_IGVFDS8929VNCP_1_CS1_seqspec_v3.yaml.gz
Checkfiles Version
v20
Attribution
Jay Shendure, UW

seqspec File Of

3 items
Read Names
fastq
reads
1
Read 1
AAAHG2HHV
1
892 MB
Jay Shendure, UW
validated
fastq
reads
1
AAAHG2HHV
1
286 MB
Jay Shendure, UW
validated
fastq
reads
1
Read 2
AAAHG2HHV
1
1.4 GB
Jay Shendure, UW
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) K562 cell line (cellular sub pool: 10Xlane2) modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library