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INDEXED
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ConfigurationFile
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IGVFFI2380POUH
IGVFFI2380POUH
released
validated
Json view
File Set
IGVFDS2114XGWE
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI1494SEOZ, IGVFFI0693OPCQ, IGVFFI6869ATIO, IGVFFI1122VRAT
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_rna_10x4_NGS1
md5sum
20781abf703f76c9f29713f5be9182b8
Content MD5sum
4fee2aee70e48d26d583e9c8b249287a
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_rna_10x4_NGS1_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0693OPCQ
fastq
reads
1
Read 1
Illumina NovaSeq X
22HHHWLT3
1
6.4 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1122VRAT
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
1
1.6 GB
Ansuman Satpathy, Stanford
validated
IGVFFI1494SEOZ
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
1
1.7 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6869ATIO
fastq
reads
1
Read 2
Illumina NovaSeq X
22HHHWLT3
1
14 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4220ALCU
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples