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IGVFFI2312GTSH

released
validated
File Set
IGVFDS1592MBRQ(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI6125FKCF, IGVFFI4314ECXU
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_7378_seqspec
md5sum
51b94cb2461df894457a2f48c5a8c6b6
Content MD5sum
3cc00807e9a1e19ed55922fc4f8d9645
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_7378_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
7378
Read 2, Barcode index
22KFF5LT3
17 GB
Jason Buenrostro, Broad
validated
fastq
reads
7378
Read 1
22KFF5LT3
9.6 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 435)

Files Derived From This File

2 items
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
6.1 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
951 MB
validated