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IGVFFI2261FPNI

released
validated
File Set
IGVFDS9151XHFL(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI2352SZMI, IGVFFI0129OQOG
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5374_seqspec
md5sum
319389e3b292697fc0afa416588342d3
Content MD5sum
a82494698bf6e6ec215dde0fb264b67b
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5374_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5374
Read 2, Barcode index
22KHF5LT3
14 GB
Jason Buenrostro, Broad
validated
fastq
reads
5374
Read 1
22KHF5LT3
8.1 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
1.2 GB
validated
tar
kallisto single cell RNAseq output
unfiltered cell by gene in kallisto single cell RNAseq output
Jason Buenrostro, Broad
4.9 GB
validated