IGVFFI2259UIHW

released
validation exempted
File Set
IGVFDS1640HKDD(quantification DNA barcode sequencing for lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide)
Summary
seqspec of IGVFFI0134GNSM, IGVFFI4931RFSB, IGVFFI0535AWPM, IGVFFI5166MAAE, IGVFFI5993IFJO, IGVFFI5266KWUB, IGVFFI9417TRDK, IGVFFI4004PHAQ, IGVFFI2499MLDS
File Format
yaml
Content Type
seqspec
md5sum
a55293f5b62386d026fe393ae94b2b0a
Content MD5sum
67d7add03583108e4ca3f6e268b342e7
File Size
1.6 KB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/count/seqspec/IGVF_shendure_progReg_HepG2_count_rep1_dna.yaml.gz"
Checkfiles Version
No version due to exemption
Submitter Comment
"This file was previously validated by legacy checkfiles and is seqspec v0.3.0. It is now local checkfiles V17 validated, patched to be validation exempted as a part of portal-wide seqspec updating effort."
Attribution

seqspec File Of

9 items
Read Names
fastq
reads
1
Barcode forward
998 MB
Nadav Ahituv, UCSF
validated
fastq
reads
1
Barcode reverse
1.0 GB
Nadav Ahituv, UCSF
validated
fastq
reads
3
Barcode reverse
818 MB
Nadav Ahituv, UCSF
validated
fastq
reads
3
UMI
868 MB
Nadav Ahituv, UCSF
validated
fastq
reads
1
UMI
1.1 GB
Nadav Ahituv, UCSF
validated
fastq
reads
2
Barcode forward
534 MB
Nadav Ahituv, UCSF
validated
fastq
reads
2
Barcode reverse
535 MB
Nadav Ahituv, UCSF
validated
fastq
reads
2
UMI
568 MB
Nadav Ahituv, UCSF
validated
fastq
reads
3
Barcode forward
815 MB
Nadav Ahituv, UCSF
validated

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
barcode to element mapping
Nadav Ahituv, UCSF
728 MB
validated