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IGVFFI2212QVWV

released
validated
File Set
IGVFDS3977WBMS(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI5401KJCX, IGVFFI0200LBQH
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5375_seqspec
md5sum
0caa333365975c52547661bc422c3d65
Content MD5sum
2cd39a76cd4028277b9685179ce5a181
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5375_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
5375
Read 2, Barcode index
22KHF5LT3
15 GB
Jason Buenrostro, Broad
validated
fastq
reads
5375
Read 1
22KHF5LT3
9.0 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
1.2 GB
validated
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
7.7 GB
validated