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INDEXED
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ConfigurationFile
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IGVFFI2212QVWV
IGVFFI2212QVWV
released
validated
Json view
File Set
IGVFDS3977WBMS
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI5401KJCX, IGVFFI0200LBQH
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_5375_seqspec
md5sum
0caa333365975c52547661bc422c3d65
Content MD5sum
2cd39a76cd4028277b9685179ce5a181
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/pilot-mouse-brain-new-pkr/SS-LS_5375_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0200LBQH
fastq
reads
5375
Read 2, Barcode index
Illumina NovaSeq 6000
22KHF5LT3
15 GB
Jason Buenrostro, Broad
validated
IGVFFI5401KJCX
fastq
reads
5375
Read 1
Illumina NovaSeq 6000
22KHF5LT3
9.0 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)