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ConfigurationFile
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IGVFFI2208DPKM
IGVFFI2208DPKM
released
validated
Json view
File Set
IGVFDS2064XDWX
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI1247MVAU, IGVFFI9768UAJI, IGVFFI5324UWNR
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_1070_seqspec
md5sum
8960de25cdf3774aca187f1b6a993537
Content MD5sum
1f47e7071ee3c95543f3902f393f58ea
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI1247MVAU_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1247MVAU
fastq
reads
1070
Read 1
Illumina NovaSeq X
22773CLT3
1.4 GB
Jason Buenrostro, Broad
validated
IGVFFI5324UWNR
fastq
reads
1070
Barcode index
Illumina NovaSeq X
22773CLT3
599 MB
Jason Buenrostro, Broad
validated
IGVFFI9768UAJI
fastq
reads
1070
Read 2
Illumina NovaSeq X
22773CLT3
675 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8154CBUO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 183)