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INDEXED
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ConfigurationFile
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IGVFFI2199JMYY
IGVFFI2199JMYY
released
validated
Json view
File Set
IGVFDS4886GWPA
(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI2872AMLA, IGVFFI8664VYHD
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_8359_seqspec
md5sum
2b20d7ee1dd35b56b1bcdd9c577852c1
Content MD5sum
eeb61a1e4e386b155452c4dff3253bd0
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/mouse-bridge/SS-LS_8359_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
2 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2872AMLA
fastq
reads
8359
Read 1
Illumina NovaSeq X
22V3MJLT3
1.1 GB
Jason Buenrostro, Broad
validated
IGVFFI8664VYHD
fastq
reads
8359
Read 2, Barcode index
Illumina NovaSeq X
22V3MJLT3
1.9 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1072XOVT
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 533)