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ConfigurationFile
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IGVFFI2171BLPW
IGVFFI2171BLPW
released
validated
Json view
File Set
IGVFDS4920EJIH
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2023ATQJ, IGVFFI0245EBBG, IGVFFI4793EPUR
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4353_seqspec
md5sum
0b9a8cbd4203d6751634699787736032
Content MD5sum
2a0bd533a44ac89e448877e9d4209304
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI2023ATQJ_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0245EBBG
fastq
reads
4353
Read 2
Illumina NovaSeq 6000
H75F7DSX5
1.2 GB
Jason Buenrostro, Broad
validated
IGVFFI2023ATQJ
fastq
reads
4353
Read 1
Illumina NovaSeq 6000
H75F7DSX5
2.6 GB
Jason Buenrostro, Broad
validated
IGVFFI4793EPUR
fastq
reads
4353
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
969 MB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8689KFPE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 176)