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INDEXED
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ConfigurationFile
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IGVFFI2161YZQS
IGVFFI2161YZQS
released
validated
Json view
File Set
IGVFDS8107GLLI
(single-nucleus RNA sequencing assay (10x multiome with MULTI-seq))
Summary
seqspec of IGVFFI5668LRRA, IGVFFI9708PJHJ, IGVFFI6877PGZX, IGVFFI1574EXKP
File Format
yaml
Content Type
seqspec
Aliases
ansuman-satpathy:seqspec_igvf_exp13_rna_10x3_NGS3
md5sum
0bd10cfef5d81ab44df57f3df04b4cd2
Content MD5sum
c70b175e8ce25bf433e9201213a80393
File Size
1.4 KB
Submitted File Name
/home/users/cmcginni/igvf_utils_out/seqspec/igvf_exp13_rna_10x3_NGS3_rna_seqspec.yaml.gz
Checkfiles Version
v16
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
seqspec File Of
4 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1574EXKP
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
3
1.7 GB
Ansuman Satpathy, Stanford
validated
IGVFFI5668LRRA
fastq
reads
1
Read 2
Illumina NovaSeq X
22HHHWLT3
3
14 GB
Ansuman Satpathy, Stanford
validated
IGVFFI6877PGZX
fastq
reads
1
Read 1
Illumina NovaSeq X
22HHHWLT3
3
6.3 GB
Ansuman Satpathy, Stanford
validated
IGVFFI9708PJHJ
fastq
reads
1
Illumina NovaSeq X
22HHHWLT3
3
1.9 GB
Ansuman Satpathy, Stanford
validated
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1606SNOP
MultiplexedSample
left coronary artery
coronary artery disorder
multiplexed sample: Homo sapiens (female, 48 years) left coronary artery tissue associated with coronary artery disorder; Homo sapiens (female, 73 years) left coronary artery tissue associated with coronary artery disorder; ... and 2 more samples