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IGVFFI2090VQMW

released
validated
File Set
IGVFDS8535JZRF(single-cell RNA sequencing assay (SHARE-seq))
Summary
seqspec of IGVFFI5191KEYH, IGVFFI2756OYVG
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_2007_seqspec
md5sum
bc9d0870b7693715b7453247d6eafa9c
Content MD5sum
eee9a9b4866d6c2beb4d97da0bd58d2d
File Size
1.2 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/SS-LS_2007_seqspecv3.yaml.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

seqspec File Of

2 items
Read Names
fastq
reads
249
Read 2, Barcode index
726 MB
Jason Buenrostro, Broad
validated
fastq
reads
249
Read 1
407 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)

Files Derived From This File

2 items
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
367 MB
validated
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.2 GB
validated