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ConfigurationFile
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IGVFFI2056MXOE
IGVFFI2056MXOE
released
validated
Json view
File Set
IGVFDS4938RHAV
(single-cell ATAC-seq (SHARE-seq))
Summary
seqspec of IGVFFI2479BIWD, IGVFFI3900EWRC, IGVFFI7286EIRS
File Format
yaml
Content Type
seqspec
Aliases
buenrostro-bernstein:SS-LS_4330_seqspec
md5sum
58405d446888d9e5734ae31aabb3e9a7
Content MD5sum
4647c6286dba8f4fb5614402c82b0d0b
File Size
1.3 KB
Submitted File Name
gs://sw-igvf-submission/seqspec-v3/cirm/IGVFFI2479BIWD_seqspec.yaml.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
seqspec File Of
3 items
Accession
File Format
Content Type
Sequencing Run
Read Names
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI2479BIWD
fastq
reads
4330
Read 1
Illumina NovaSeq 6000
H75F7DSX5
2.8 GB
Jason Buenrostro, Broad
validated
IGVFFI3900EWRC
fastq
reads
4330
Read 2
Illumina NovaSeq 6000
H75F7DSX5
1.3 GB
Jason Buenrostro, Broad
validated
IGVFFI7286EIRS
fastq
reads
4330
Barcode index
Illumina NovaSeq 6000
H75F7DSX5
1.0 GB
Jason Buenrostro, Broad
validated
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2637MMKV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 176)